本发明属于基因领域,涉及美洲大蠊断肢再生相关基因及其dsrna的应用。
背景技术:
蟑螂原产于非洲,好潮湿、温暖、黑暗的环境;喜欢躲藏在隐蔽的缝隙中;活动时间集中在夜晚,是世界性卫生害虫。美洲大蠊是蜚蠊科中体积最大的昆虫,它食性广泛,喜食糖和淀粉,污染食物、传播病菌和寄生虫,是世界性卫生害虫。在南方地区为室内优势品种,主要生存于下水道、暖气沟、厕所、浴室及酿造厂、酱品厂等阴暗潮湿的环境,容易传播疾病。
美洲大蠊具有避光性与聚集性,在饲养美洲大蠊时,在饲养缸中放置一些折叠纸板、纸筒以便遮光并供其栖息。美洲大蠊低龄若虫常常群聚在一起,这可能与分泌的信息素有关系,栖息时往往栖息在生活空间的最下层。他们一年中7、8和9月份的食量最大,也是他们繁殖最为旺盛的季节。他们也有一个特别的行为习性,即是互相残杀。即使在食物、饮水供应充足的条件下,仍频有互噬的现象出现,包括食卵、噬皮蜕、噬幼龄若虫和蜕皮若虫等情况。食卵现象比较多见,饲养缸中常见被食卵荚的残余部分,尾部夹持卵荚的雌虫被其他成虫追咬的情形也时有发生。但未发现若虫之间或成虫之间互食现象,所以它们仍能群聚在一起。
为了防止美洲大蠊,经常使用的化学农药和有机杀虫剂在害虫防治实践中表现出高效的杀虫效果,为害虫防治带来了革命性改变。但随着其长期大量使用,农药残留、水源和环境污染、生物链中断、生态失衡等一系列负面问题日益凸显。卫生环境的重视及蟑螂抗药性问题的出现,迫使我们要开发一种环境友好、高效、无毒的蟑螂防治方法,其中生物防治技术将为蟑螂防治提供一个新的防治方向。
技术实现要素:
本发明目的在于提供美洲大蠊断肢再生相关基因及其dsrna的应用。
本发明所采取的技术方案是:
定量检测hh、ptc、smo或/和cirna的试剂在制备促进美洲大蠊断肢再生的试剂中的应用。
定量检测hh、ptc、smo或/和cirna的试剂在制备防治美洲大蠊的试剂盒中的应用。
进一步的,所述定量检测hh、ptc、smo或/和cirna的试剂选自定量检测hh、ptc、smo或/和ci的rna转录水平的试剂。
进一步的,所述定量检测hh、ptc、smo或/和ci的rna转录水平的试剂选自定量检测hh、ptc、smo或/和ci的引物。
进一步的,所述定量检测hh、ptc、smo或/和ci的引物为:
hh:
hhqpcrf:5’-gagtccagagcgcacatcca-3’(seqidno.21);
hhqpcrr:5’-tcctccgagaagcagccacc-3’(seqidno.22);
ptc.:
ptcqpcrf:5’-atgcgtttctgagtgcg-3’(seqidno.23);
ptcqpcrr:5’-gtaatttctgattggtggg-3’(seqidno.24);
smo:
smoqpcrf:5’-gtaagatccgcaaggt-3’(seqidno.25);
smoqpcrr:5’-cgtctgatggtggtaat-3’(seqidno.26);
ci.:
ciqpcrf:5’-aatggagggctcgaagat-3’(seqidno.27);
ciqpcrr:5’-tactgtcacggcgtaggtt-3’(seqidno.28)。
抑制hh、ptc、smo或/和ci表达的试剂在制备阻断美洲大蠊断肢再生的试剂中的应用。
进一步的,所述抑制hh、ptc、smo或/和ci表达的试剂为抑制hh、ptc、smo或/和cirna转录水平的试剂。
进一步的,所述抑制hh、ptc、smo或/和cirna转录水平的试剂选自沉默hh、ptc、smo或/和ci表达的sirna、沉默hh、ptc、smo或/和ci表达的shrna和沉默hh、ptc、smo或/和ci表达的dsrna的至少一种。
进一步的,所述沉默hh、ptc、smo或/和ci表达的dsrna选自以下序列:
靶向沉默hh基因的dsrna序列:
aacacccuuccagcaagcggucucaccgaggggcgcgugacccgcaaagacccucgcuucagggaucuggugcccaacuacaacgcagacaucguguucaaggacgaggaaggcacgggcgccgaccgccucaugacgcagaggugcaaggagaagcugaacacgcuggccaucucggugaugaaccaguggcccggcgugaagcugcgggugacggagggcugggacgaggaggggcaccacgccguggacucgcugcacuacgagggccgagccgucgacgucaccaccuccgacagggaucgagccaaguacggcaugcuggcgcgccucgccguggaggcgggcuucgacuggg(seqidno.17);
靶向沉默ptc基因的dsrna序列:
uucgacgagcacuauauagaccaaauauuccuaaacauuaucccuugugccaucauuacuccauuagacuguuuuugggaagcuucgaagcuucugggaccagauuauccuguucaaauaccaggcgugggcuccaaggugcgcuggacgaaccuuaacccacaacaacuaauccaacaaaugaagacugucgaauugguauucccuuucgagacucucgaagacuacaugaaaagggcggggauaagcacgggcuaccaagagaagccgugucucgaccccuccgaccccgaaugcccgaccaccgcccccaacaaguuauccggacagauaccugacaucggggcagagcugacaggaggcugcuacggauaugcagccaaauauaugcacuggccugaggaccugguggugggcggagccacacgaaauaagacuggacacauacaaagggcgcgugcauugcagacuguggugcaacuaaugggagagagagagauguaugaauucuggucuaaaacguacaaaguccaucacuuggauuggacacaagaaaaagcugcuuuaauucucgagacauggcagaggc(seqidno.18);
靶向沉默smo基因的dsrna序列:
acuuguaauuuucuauaucaauugcuguuuuuuggugucauguauuggaugguuggcacaguuuauuccuggugcacgugaaggcauuauaugccggaaagaugguacuuuaaggaugucagaaccuaauacuggagagaauuugucaugugugauaauauuuguauugguguauuacuucaucauggcugccuuugugugguuuguaauucucacguacacauggcacaucaguuuucaagcucuagguaaaauucaagagcgaauugauaagaaaagugcuuauuuucacaugguggcuuggucauugccucuaguucuuacuauuacaacuauggcacuaggggaaauagauggcgacaguguugcugguaucuguuuugugggauauguuaaucaugcugcacgagcaggauucuugcucguccccauuacaacaguacuuuuuguuggaggauacuuucucacuaggggucuuauaacacuggugagacuaaaaauuaacagucaagaaauuaucucagaaagagcaagugccaagauaagagaaaccauugugcgcaugggucucuuuucacuguuuacauuugucuuuguguu(seqidno.19);
靶向沉默ci基因的dsrna序列:
gaucucgucaagcacaucaacaaugaccacauucaugccaacaagaagucguuugugugccgcugggaagacuguucaagggacgagaagcccuucaaagcgcaguauaugcugguggugcacaugcgacgacacacaggggagaagccccacaaauguacauuugaagggugcuacaaagccuauucgaggcuggagaaccugaagacgcaccucagaucucauacaggagaaaaacccuacaugugugaguauccuggaugcagcaaagccuucagcaaugcguccgaccgugccaaacaccagaaccgcacgcacuccaacgagaaaccguacguguguaaggccccgggcugcaccaagagguacacagaccccaguucgcugcggaagcacgugaagacagugcacggugccgaguucuaugccaacaagaagcacaagggagcuggcgacggcgccgaggauggcucuggaggggcgggaggccuacuggacagcagcccgcacagcgaggagaugaugagcggcaagacggcc(seqidno.20)。
一种促进美洲大蠊断肢再生的试剂盒,其特征在于,该试剂盒含有定量检测hh、ptc、smo或/和cirna的试剂。
进一步的,所述定量检测hh、ptc、smo或/和cirna的试剂为定量检测hh、ptc、smo或/和ci的rna转录水平的试剂。
进一步的,所述的定量检测hh、ptc、smo或/和cirna转录水平的试剂选自定量检测hh、ptc、smo或/和ci的引物。
进一步的,所述的定量检测hh、ptc、smo或/和ci的引物为:
hh:
hhqpcrf:5’-gagtccagagcgcacatcca-3’(seqidno.21);
hhqpcrr:5’-tcctccgagaagcagccacc-3’(seqidno.22);
ptc.:
ptcqpcrf:5’-atgcgtttctgagtgcg-3’(seqidno.23);
ptcqpcrr:5’-gtaatttctgattggtggg-3’(seqidno.24);
smo:
smoqpcrf:5’-gtaagatccgcaaggt-3’(seqidno.25);
smoqpcrr:5’-cgtctgatggtggtaat-3’(seqidno.26);
ci.:
ciqpcrf:5’-aatggagggctcgaagat-3’(seqidno.27);
ciqpcrr:5’-tactgtcacggcgtaggtt-3’(seqidno.28)。
一种阻断美洲大蠊断肢再生的试剂盒,该试剂盒含有抑制hh、ptc、smo或/和ci表达的试剂。
进一步的,所述抑制hh、ptc、smo或/和ci表达的试剂为抑制hh、ptc、smo或/和ci的rna转录水平的试剂。
进一步的,所述抑制hh、ptc、smo或/和ci的rna转录水平的试剂选自沉默hh、ptc、smo或/和ci表达的sirna、沉默hh、ptc、smo或/和ci表达的shrna和沉默hh、ptc、smo或/和ci表达的dsrna的至少一种。
进一步的,所述的沉默hh、ptc、smo或/和ci的表达的dsrna选自以下序列:
靶向沉默hh基因的dsrna序列:
aacacccuuccagcaagcggucucaccgaggggcgcgugacccgcaaagacccucgcuucagggaucuggugcccaacuacaacgcagacaucguguucaaggacgaggaaggcacgggcgccgaccgccucaugacgcagaggugcaaggagaagcugaacacgcuggccaucucggugaugaaccaguggcccggcgugaagcugcgggugacggagggcugggacgaggaggggcaccacgccguggacucgcugcacuacgagggccgagccgucgacgucaccaccuccgacagggaucgagccaaguacggcaugcuggcgcgccucgccguggaggcgggcuucgacuggg(seqidno.17);
靶向沉默ptc基因的dsrna序列:
uucgacgagcacuauauagaccaaauauuccuaaacauuaucccuugugccaucauuacuccauuagacuguuuuugggaagcuucgaagcuucugggaccagauuauccuguucaaauaccaggcgugggcuccaaggugcgcuggacgaaccuuaacccacaacaacuaauccaacaaaugaagacugucgaauugguauucccuuucgagacucucgaagacuacaugaaaagggcggggauaagcacgggcuaccaagagaagccgugucucgaccccuccgaccccgaaugcccgaccaccgcccccaacaaguuauccggacagauaccugacaucggggcagagcugacaggaggcugcuacggauaugcagccaaauauaugcacuggccugaggaccugguggugggcggagccacacgaaauaagacuggacacauacaaagggcgcgugcauugcagacuguggugcaacuaaugggagagagagagauguaugaauucuggucuaaaacguacaaaguccaucacuuggauuggacacaagaaaaagcugcuuuaauucucgagacauggcagaggc(seqidno.18);
靶向沉默smo基因的dsrna序列:
acuuguaauuuucuauaucaauugcuguuuuuuggugucauguauuggaugguuggcacaguuuauuccuggugcacgugaaggcauuauaugccggaaagaugguacuuuaaggaugucagaaccuaauacuggagagaauuugucaugugugauaauauuuguauugguguauuacuucaucauggcugccuuugugugguuuguaauucucacguacacauggcacaucaguuuucaagcucuagguaaaauucaagagcgaauugauaagaaaagugcuuauuuucacaugguggcuuggucauugccucuaguucuuacuauuacaacuauggcacuaggggaaauagauggcgacaguguugcugguaucuguuuugugggauauguuaaucaugcugcacgagcaggauucuugcucguccccauuacaacaguacuuuuuguuggaggauacuuucucacuaggggucuuauaacacuggugagacuaaaaauuaacagucaagaaauuaucucagaaagagcaagugccaagauaagagaaaccauugugcgcaugggucucuuuucacuguuuacauuugucuuuguguu(seqidno.19);
靶向沉默ci基因的dsrna序列:
gaucucgucaagcacaucaacaaugaccacauucaugccaacaagaagucguuugugugccgcugggaagacuguucaagggacgagaagcccuucaaagcgcaguauaugcugguggugcacaugcgacgacacacaggggagaagccccacaaauguacauuugaagggugcuacaaagccuauucgaggcuggagaaccugaagacgcaccucagaucucauacaggagaaaaacccuacaugugugaguauccuggaugcagcaaagccuucagcaaugcguccgaccgugccaaacaccagaaccgcacgcacuccaacgagaaaccguacguguguaaggccccgggcugcaccaagagguacacagaccccaguucgcugcggaagcacgugaagacagugcacggugccgaguucuaugccaacaagaagcacaagggagcuggcgacggcgccgaggauggcucuggaggggcgggaggccuacuggacagcagcccgcacagcgaggagaugaugagcggcaagacggcc(seqidno.20)。
抑制hh、ptc、smo或/和ci表达的试剂在制备防治美洲大蠊的药物中的应用。
一种检测美洲大蠊断肢再生相关的基因,所述的基因为hh、ptc、smo或/和ci;所述的hh核苷酸序列如seqidno.1所示,ptc核苷酸序列如seqidno.2所示,smo核苷酸序列如seqidno.3所示,ci核苷酸序列如seqidno.4所示。
本发明的有益效果是:
本发明针对美洲大蠊具有顽强的断肢再生能力但又很难防治的现状,发现hh、ptc、smo和ci基因的表达水平和蟑螂断肢再生密切相关,揭示了hh、ptc、smo和ci基因具有影响美洲大蠊断肢再生的能力。还证明沉默hh、ptc、smo和ci基因的表达,能抑制美洲大蠊断肢再生的能力,即可以高效除去美洲大蠊害虫,又避免了环境污染,安全可靠。说明本发明hh、ptc、smo和ci基因可以作为美洲大蠊害虫防治的防治方向。
附图说明
图1a为断肢部位示意图;
图1b为hh、ptc、smo和ci基因dsrna处理对美洲大蠊断肢再生的影响;
图2为dsrna注射后,hh、ptc、smo和ci基因表达量变化。
具体实施方式
定量检测hh、ptc、smo或/和cirna的试剂在制备促进美洲大蠊断肢再生的试剂中的应用。
优选的,所述定量检测hh、ptc、smo或/和cirna的试剂选自定量检测hh、ptc、smo或/和ci的rna转录水平的试剂。
优选的,所述定量检测hh、ptc、smo或/和ci的rna转录水平的试剂选自定量检测hh、ptc、smo或/和ci的引物。
优选的,所述定量检测hh、ptc、smo或/和ci的引物为:
hh:
hhqpcrf:5’-gagtccagagcgcacatcca-3’(seqidno.21);
hhqpcrr:5’-tcctccgagaagcagccacc-3’(seqidno.22);
ptc.:
ptcqpcrf:5’-atgcgtttctgagtgcg-3’(seqidno.23);
ptcqpcrr:5’-gtaatttctgattggtggg-3’(seqidno.24);
smo:
smoqpcrf:5’-gtaagatccgcaaggt-3’(seqidno.25);
smoqpcrr:5’-cgtctgatggtggtaat-3’(seqidno.26);
ci.:
ciqpcrf:5’-aatggagggctcgaagat-3’(seqidno.27);
ciqpcrr:5’-tactgtcacggcgtaggtt-3’(seqidno.28)。
抑制hh、ptc、smo或/和ci表达的试剂在制备阻断美洲大蠊断肢再生的试剂中的应用。
优选的,所述抑制hh、ptc、smo或/和ci表达的试剂为抑制hh、ptc、smo或/和cirna转录水平的试剂。
优选的,所述抑制hh、ptc、smo或/和cirna转录水平的试剂选自沉默hh、ptc、smo或/和ci表达的sirna、沉默hh、ptc、smo或/和ci表达的shrna和沉默hh、ptc、smo或/和ci表达的dsrna的至少一种。
优选的,所述沉默hh、ptc、smo或/和ci表达的dsrna选自以下序列:
靶向沉默hh基因的dsrna序列:
aacacccuuccagcaagcggucucaccgaggggcgcgugacccgcaaagacccucgcuucagggaucuggugcccaacuacaacgcagacaucguguucaaggacgaggaaggcacgggcgccgaccgccucaugacgcagaggugcaaggagaagcugaacacgcuggccaucucggugaugaaccaguggcccggcgugaagcugcgggugacggagggcugggacgaggaggggcaccacgccguggacucgcugcacuacgagggccgagccgucgacgucaccaccuccgacagggaucgagccaaguacggcaugcuggcgcgccucgccguggaggcgggcuucgacuggg(seqidno.17);
靶向沉默ptc基因的dsrna序列:
uucgacgagcacuauauagaccaaauauuccuaaacauuaucccuugugccaucauuacuccauuagacuguuuuugggaagcuucgaagcuucugggaccagauuauccuguucaaauaccaggcgugggcuccaaggugcgcuggacgaaccuuaacccacaacaacuaauccaacaaaugaagacugucgaauugguauucccuuucgagacucucgaagacuacaugaaaagggcggggauaagcacgggcuaccaagagaagccgugucucgaccccuccgaccccgaaugcccgaccaccgcccccaacaaguuauccggacagauaccugacaucggggcagagcugacaggaggcugcuacggauaugcagccaaauauaugcacuggccugaggaccugguggugggcggagccacacgaaauaagacuggacacauacaaagggcgcgugcauugcagacuguggugcaacuaaugggagagagagagauguaugaauucuggucuaaaacguacaaaguccaucacuuggauuggacacaagaaaaagcugcuuuaauucucgagacauggcagaggc(seqidno.18);
靶向沉默smo基因的dsrna序列:
acuuguaauuuucuauaucaauugcuguuuuuuggugucauguauuggaugguuggcacaguuuauuccuggugcacgugaaggcauuauaugccggaaagaugguacuuuaaggaugucagaaccuaauacuggagagaauuugucaugugugauaauauuuguauugguguauuacuucaucauggcugccuuugugugguuuguaauucucacguacacauggcacaucaguuuucaagcucuagguaaaauucaagagcgaauugauaagaaaagugcuuauuuucacaugguggcuuggucauugccucuaguucuuacuauuacaacuauggcacuaggggaaauagauggcgacaguguugcugguaucuguuuugugggauauguuaaucaugcugcacgagcaggauucuugcucguccccauuacaacaguacuuuuuguuggaggauacuuucucacuaggggucuuauaacacuggugagacuaaaaauuaacagucaagaaauuaucucagaaagagcaagugccaagauaagagaaaccauugugcgcaugggucucuuuucacuguuuacauuugucuuuguguu(seqidno.19);
靶向沉默ci基因的dsrna序列:
gaucucgucaagcacaucaacaaugaccacauucaugccaacaagaagucguuugugugccgcugggaagacuguucaagggacgagaagcccuucaaagcgcaguauaugcugguggugcacaugcgacgacacacaggggagaagccccacaaauguacauuugaagggugcuacaaagccuauucgaggcuggagaaccugaagacgcaccucagaucucauacaggagaaaaacccuacaugugugaguauccuggaugcagcaaagccuucagcaaugcguccgaccgugccaaacaccagaaccgcacgcacuccaacgagaaaccguacguguguaaggccccgggcugcaccaagagguacacagaccccaguucgcugcggaagcacgugaagacagugcacggugccgaguucuaugccaacaagaagcacaagggagcuggcgacggcgccgaggauggcucuggaggggcgggaggccuacuggacagcagcccgcacagcgaggagaugaugagcggcaagacggcc(seqidno.20)。
一种促进美洲大蠊断肢再生的试剂盒,其特征在于,该试剂盒含有定量检测hh、ptc、smo或/和cirna的试剂。
优选的,所述定量检测hh、ptc、smo或/和cirna的试剂为定量检测hh、ptc、smo或/和ci的rna转录水平的试剂。
优选的,所述的定量检测hh、ptc、smo或/和cirna转录水平的试剂选自定量检测hh、ptc、smo或/和ci的引物。
优选的,所述的定量检测hh、ptc、smo或/和ci的引物为:
hh:
hhqpcrf:5’-gagtccagagcgcacatcca-3’(seqidno.21);
hhqpcrr:5’-tcctccgagaagcagccacc-3’(seqidno.22);
ptc.:
ptcqpcrf:5’-atgcgtttctgagtgcg-3’(seqidno.23);
ptcqpcrr:5’-gtaatttctgattggtggg-3’(seqidno.24);
smo:
smoqpcrf:5’-gtaagatccgcaaggt-3’(seqidno.25);
smoqpcrr:5’-cgtctgatggtggtaat-3’(seqidno.26);
ci.:
ciqpcrf:5’-aatggagggctcgaagat-3’(seqidno.27);
ciqpcrr:5’-tactgtcacggcgtaggtt-3’(seqidno.28)。
一种阻断美洲大蠊断肢再生的试剂盒,该试剂盒含有抑制hh、ptc、smo或/和ci表达的试剂。
优选的,所述抑制hh、ptc、smo或/和ci表达的试剂为抑制hh、ptc、smo或/和ci的rna转录水平的试剂。
优选的,所述抑制hh、ptc、smo或/和ci的rna转录水平的试剂选自沉默hh、ptc、smo或/和ci表达的sirna、沉默hh、ptc、smo或/和ci表达的shrna和沉默hh、ptc、smo或/和ci表达的dsrna的至少一种。
优选的,所述的沉默hh、ptc、smo或/和ci的表达的dsrna选自以下序列:
靶向沉默hh基因的dsrna序列:
aacacccuuccagcaagcggucucaccgaggggcgcgugacccgcaaagacccucgcuucagggaucuggugcccaacuacaacgcagacaucguguucaaggacgaggaaggcacgggcgccgaccgccucaugacgcagaggugcaaggagaagcugaacacgcuggccaucucggugaugaaccaguggcccggcgugaagcugcgggugacggagggcugggacgaggaggggcaccacgccguggacucgcugcacuacgagggccgagccgucgacgucaccaccuccgacagggaucgagccaaguacggcaugcuggcgcgccucgccguggaggcgggcuucgacuggg(seqidno.17);
靶向沉默ptc基因的dsrna序列:
uucgacgagcacuauauagaccaaauauuccuaaacauuaucccuugugccaucauuacuccauuagacuguuuuugggaagcuucgaagcuucugggaccagauuauccuguucaaauaccaggcgugggcuccaaggugcgcuggacgaaccuuaacccacaacaacuaauccaacaaaugaagacugucgaauugguauucccuuucgagacucucgaagacuacaugaaaagggcggggauaagcacgggcuaccaagagaagccgugucucgaccccuccgaccccgaaugcccgaccaccgcccccaacaaguuauccggacagauaccugacaucggggcagagcugacaggaggcugcuacggauaugcagccaaauauaugcacuggccugaggaccugguggugggcggagccacacgaaauaagacuggacacauacaaagggcgcgugcauugcagacuguggugcaacuaaugggagagagagagauguaugaauucuggucuaaaacguacaaaguccaucacuuggauuggacacaagaaaaagcugcuuuaauucucgagacauggcagaggc(seqidno.18);
靶向沉默smo基因的dsrna序列:
acuuguaauuuucuauaucaauugcuguuuuuuggugucauguauuggaugguuggcacaguuuauuccuggugcacgugaaggcauuauaugccggaaagaugguacuuuaaggaugucagaaccuaauacuggagagaauuugucaugugugauaauauuuguauugguguauuacuucaucauggcugccuuugugugguuuguaauucucacguacacauggcacaucaguuuucaagcucuagguaaaauucaagagcgaauugauaagaaaagugcuuauuuucacaugguggcuuggucauugccucuaguucuuacuauuacaacuauggcacuaggggaaauagauggcgacaguguugcugguaucuguuuugugggauauguuaaucaugcugcacgagcaggauucuugcucguccccauuacaacaguacuuuuuguuggaggauacuuucucacuaggggucuuauaacacuggugagacuaaaaauuaacagucaagaaauuaucucagaaagagcaagugccaagauaagagaaaccauugugcgcaugggucucuuuucacuguuuacauuugucuuuguguu(seqidno.19);
靶向沉默ci基因的dsrna序列:
gaucucgucaagcacaucaacaaugaccacauucaugccaacaagaagucguuugugugccgcugggaagacuguucaagggacgagaagcccuucaaagcgcaguauaugcugguggugcacaugcgacgacacacaggggagaagccccacaaauguacauuugaagggugcuacaaagccuauucgaggcuggagaaccugaagacgcaccucagaucucauacaggagaaaaacccuacaugugugaguauccuggaugcagcaaagccuucagcaaugcguccgaccgugccaaacaccagaaccgcacgcacuccaacgagaaaccguacguguguaaggccccgggcugcaccaagagguacacagaccccaguucgcugcggaagcacgugaagacagugcacggugccgaguucuaugccaacaagaagcacaagggagcuggcgacggcgccgaggauggcucuggaggggcgggaggccuacuggacagcagcccgcacagcgaggagaugaugagcggcaagacggcc(seqidno.20)。
抑制hh、ptc、smo或/和ci表达的试剂在制备防治美洲大蠊的药物中的应用。
一种检测美洲大蠊断肢再生相关的基因,所述的基因为hh、ptc、smo或/和ci;所述的hh核苷酸序列如seqidno.1所示,ptc核苷酸序列如seqidno.2所示,smo核苷酸序列如seqidno.3所示,ci核苷酸序列如seqidno.4所示。
下面结合具体实施例对本发明作进一步的说明。
实施例1断肢再生相关hedgehog信号通路基因的数据库搜索
基于美洲大蠊基因组数据库,采用生物信息学方法对美洲大蠊hedgehog信号通路中的hh、ptc、smo和ci基因进行搜索,经过序列分析及比对后,获得美洲大蠊hedgehog信号通路中的hh、ptc、smo和ci基因序列,分别为seqidno.1、seqidno.2、seqidno.3和seqidno.4。
hh基因的核苷酸序列如seqidno.1所示:
atgagggcgggggcgctgatgtggggggcgctgctgctgctggcggcgtcggcgtcgggctgcgggcccggacgagggggagggcgccgtcccgtgccccgcaagttgacccccctcgtgttcaaacagcacgtgcccaacgtaagcgaaaacacccttccagcaagcggtctcaccgaggggcgcgtgacccgcaaagaccctcgcttcagggatctggtgcccaactacaacgcagacatcgtgttcaaggacgaggaaggcacgggcgccgaccgcctcatgacgcagaggtgcaaggagaagctgaacacgctggccatctcggtgatgaaccagtggcccggcgtgaagctgcgggtgacggagggctgggacgaggaggggcaccacgccgtggactcgctgcactacgagggccgagccgtcgacgtcaccacctccgacagggatcgagccaagtacggcatgctggcgcgcctcgccgtggaggcgggcttcgactgggtgtactacgagtccagagcgcacatccactgctccgtcaagtcggagtcgtcgcaagcggccaagtcgggtggctgcttctcggaggagacgaccgtcgagacgtcgagcggcgcgcgtgtgcgcctggccgacctgcgagtcggagatcgcgtcctggcgctggacctggcgtcgggacgcctcacgtacagcgaagttgatgcagggagtgttcgcgccactcacgcgagagggcaccatcgtcgcggacggcgtcgtggcgtcgtgctacgcggtggtggacagtcagtggctcgcacacctcacctacgcgccttttag(seqidno.1);
部分ptc基因的核苷酸序列如seqidno.2所示:
attacttggagtctaaaagacatgtgttactcgcccagtattcctgacttcgacgagcactatatagaccaaatattcctaaacattatcccttgtgccatcattactccattagactgtttttgggaagcttcgaagcttctgggaccagattatcctgttcaaataccaggcgtgggctccaaggtgcgctggacgaaccttaacccacaacaactaatccaacaaatgaagactgtcgaattggtattccctttcgagactctcgaagactacatgaaaagggcggggataagcacgggctaccaagagaagccgtgtctcgacccctccgaccccgaatgcccgaccaccgcccccaacaagttatccggacagatacctgacatcggggcagagctgacaggaggctgctacggatatgcagccaaatatatgcactggcctgaggacctggtggtgggcggagccacacgaaataagactggacacatacaaagggcgcgtgcattgcagactgtggtgcaactaatgggagagagagagatgtatgaattctggtctaaaacgtacaaagtccatcacttggattggacacaagaaaaagctgctttaattctcgagacatggcagaggcgattttcagaggaggttcgacggtccctaacaactgataatagcacggcatcttacaacatgtatgcattctcgactgtaacattaaacgatatactaagtcaattttcagagctaagcgtagtcaaagttgttgtcggatatatttttatgttggcatatgcaggagtctctctcctcaggtggcacgatccagttcgttcacaagctggtgtggggcttgctggagtactcttggtgtccatcacagtcgcagcaggtcttgggttctgtgctctgctgggcattgccttcaatgcttccaccacacaaattgtgccattcctcgcattgggccttggtgtcgatgatatgttcttgttgacacatacatatgcagagcaggaacaaggccagggaggttctcacaatcagtaccaacctgacgaacagaccggtgttgtgctcaagaggactggactcagtatcctcctcacctcactcagcaacatatgcgctttctttgctgctgccatcatccccatcccagcactgcgggtcttctcgttacaggctgcagtgctggtaatgttcaacctgggctgcacgctgctcgtcttcccagcagtggtcagtctcgatttaagaagaagacggtcaggccgtgtggacattctatgctgctgcctgcctgggggtcccacaggctctgaatggccttgctgtactctgcctaacgtcccaacaggccatctcgttcacgtgcctagaagacggagagggcaggttgtgccagaacctccaaggatgctccaaacaatcacgagagctctgccccccgacagacagcagactgttactgtgctggcacagccggcagctcctacacagccgcagacacccgaatgctgggtagggtccacaagagaactgttaacgctagatcctgagagggggcagggagctgttggaggttgtggcggccatcacatcatgcacgaatgttggagttggtcactcacaaggctagcagctacgcattatgcacctcttatcaccaaatcaccagtgaaggttgtgtcgatggtggtgctggtggtgatcctggcaggaagcgtttggggcattaccaaagtcacggacggcctggacttaactgacatagtccctcagaacacagacgagcatgcgtttctgagtgcgcagggtcggttcttcggcttctacaacatgtatgccgtgacgcagggtgactttgagtaccccaccaatcagaaattactgtatgaataccatgaggcattcatgcgcgtccctaacatcatcaagaacgatgatggtggtcttccagagttctggctcagtcttttccgggactggcttataggactccagaaggctttcgaccgagactggtctcgggggagtattacacaggaacggtggttctctaacgcatcagatgaggggatccttgcctacaagctgctggttcagactgggcatgtcgacaaccccatcgacaagtcacttattactcaggttaggctggttgatgcagaaggaatcatcaatcctaaagctttctacaactacctcagtgcctgggcatctaatgatgctttggcatacggagcttcgcaggcaaacctgcgaccagagccaaaatcctggtaccacgctacaaaagacttcgagctcaagatacccaagtccgcacctctggtgtacacccagctgcctttctatttacacggcctgggtgacacacaacacatcactaatcttattgctcaggtgcgggcgttgtgtcagaagttcgaagagcgaggactccccaactttccctcagggattcccttcctcttctgggagcaatacctcgggctacggcagtcgctgggtctggctttgctctgtgcattagctgcagtcttcctggtggtggctgtattgttgctcaatctgtgggctgcgaccctagtggtgctggccctggcagccatggtgcttcagctgcttggagtcatgggggccctcggaatcaagctcagtgcaatacctgctgtcctccttattgttgctgtgggcatcggcgtccacttcacagtacacatctgcctggggtttgtgacaagcataggaggaagagatcgacggacacgtctcgcattggagcagatgtttgcccctgtcactcacggagccctcacgacactgcttggtatctttatgctggccttttcagagtttgacttcattgtgaggtatttcttctacgtgctgcttgctctagtggtcgttggtctccttactggtctagtcttctttccagttttgctgtcgctaataggaccagctgccgaggttgtaccacatgagttccctgatcgcatttcgacacctacacctcctccatctcctgtgaggacgaggattggttcatgtcgggtagggaaggctccaccacagcccaggagaggtcacgggggtatgcagtgcaaccgcttacatgcagagccatccctcacgaccatcacagaggaagcgaactcatggcactcaactcatgagattgttgtacagcctgagctggtggtcgagactaccacttatggaacgcctcagactgcaagtcaaactacgggaggcagtggtgaaggttctggagcaggtcagacctcgacatctccccctcctcctccagggtctcagtcacacgtcaccacaaaggttacagccacaactctcgtcaaggttgaggtccacgcaccactgccaggagctgttgaacgtgatttgggaagcagcagtagcagcaataagagtcgctcaagtcgtcggagagactcaagctcgggatccgaccacgattcttcttcagataacaactcaggcaaacaaggtggtaccaccgcttcctag(seqidno.2);
smo基因的核苷酸序列如seqidno.3所示:
atgaagatcttacataaggaaattatctatttaaaaaaatttcggctggcaatgcaaggattttttgcatcgaagttcgtcgtcttcgtattaactgctattattgagcctcttcatgtcgtgggagaatttagaggaaatgtgactgttttagtaagatccgcaaggtatgaaggagatcatgcattccttcgggacaaattttcatcagctgattccatcatattaccaccatcagacgggaaaggaccgtactgcagacacccagctcgttgtgaacaacttaattatacaacctgcatgggagttaaacttccttatacatctactacacttgatttggtggaaaatttaggtacacaggaactcgtacaggaaaaattacaacagtggcaaggattacgtcacattccgaaatgttggactgtcgttcaaccatttctctgtgctttatacatgcccaaatgtgagaatgggacagtggatctgccatcacaggaaatgtgcaaaatgacagtgggcccatgtcgaatactggaatcttacaaaagttggccatcgttcttcagatgtgacgacacagttagatttccaccaatgtgtaagaatgatgcccgagagctgaagtacaatactactagtcagtgccagagtcctttggtgccaactgacaatactctagcattctatgatggaatagaaggatgtggcattcagtgccaaaatccattgcttacagaagacgaacatagacagatccatcagttaattgcttgggcaggaaccatttgccttctttttaatatcttcacagtggtaacctttttcattgattggcgttctgcaaacaagtatccagcacttgtaattttctatatcaattgctgttttttggtgtcatgtattggatggttggcacagtttattcctggtgcacgtgaaggcattatatgccggaaagatggtactttaaggatgtcagaacctaatactggagagaatttgtcatgtgtgataatatttgtattggtgtattacttcatcatggctgcctttgtgtggtttgtaattctcacgtacacatggcacatcagttttcaagctctaggtaaaattcaagagcgaattgataagaaaagtgcttattttcacatggtggcttggtcattgcctctagttcttactattacaactatggcactaggggaaatagatggcgacagtgttgctggtatctgttttgtgggatatgttaatcatgctgcacgagcaggattcttgctcgtccccattacaacagtactttttgttggaggatactttctcactaggggtcttataacactggtgagactaaaaattaacagtcaagaaattatctcagaaagagcaagtgccaagataagagaaaccattgtgcgcatgggtctcttttcactgtttacatttgtctttgtgttggtgacctttgtgtgtcatgtgtacgaatttcatcatcacagtgactggagagaaagtttcagaaaattcatagtttgccgaattatgagcagtggtaatgcagacacaaagagatgtaagatagagtctcgaccaagtctctcaatgatgcaactgcatatattggtgatgttcttggcaggtgtcataatgtcatcatgggtatggacgagctccacagttgacacctggagaagatgtctcagaaggacttttaatactcaagcagaagaacccgtcagattgaagaagcataaagttattgctcaagcatttgcaaaaaggaagacattcaacaatgcaggtcgcctctccattagttttcatagcacccatgaggatcctgtaggtttaaattttgatatgaacagtattgcatcacaagacttcagctcaacctgggcagcagcattaccgaagctgatgacacgacgtggtgctcttattggtgttgccactggctcaaactcaagccagcatcgaaactcgatagactccgaaatcagttacagtgtgagaagggtgtcagttgaatcacgtcgccactcattggactcccaagtgtctgtacagattgctgaagtaacagcaacacgaaaagctgcagccactcctatgcctgcagcaagtactgcaactgtgtctggtggaaggggcagaaaaactcgcagtcgaagacaaagaagagagtttggacgtattcgaagtagtcgtgtgggacctcttttgattaggagaggcagtacaacatcacaagaaagtcagttaggagcacaaattctgtcagcacttactctagcaaatacaactcttccatcatttgttcccaatctaaagaaacgaaggactggcaatgcaggtttggacagctctaaagtcattctgccattcgccctgccagatcagagtcttgatgtaagtgatgaagaacaaaacagtgatgagaagatttctgggacaataaaaaaatttgatatctttctttgtagagaagctaatgatgtggatttggaggatattaatgacagtgatggggagatcagtgatggaatgccagcagaaaacgatatgaaagttgtaatagcaagtaagtttaatgaagatgagaatgatgacagaaatgatgatattaataataaacggaaaaacagaagtaccgaaattaatgcaaacactgtaagtgcaaatgatggcatccatattgaggaagatcagaaaaattccattgttgatatgggttcccatcatagtataagtgcagaagttgatgattatcgaagtagaacttcagagggaaacaggtatagaaataactatggcgattgtaaaaacataaatatacctgatgaagtgaaattgtatcttacagaaggctctgatgatgaacctccacaaaaattgaatttcgttccttctgtagatattggaggtgtttcagatggttccacatcattttgtcctgagctttctcatctagttgtgcagtcctcccattcaggtctgtcacaaggaagccctcataactttgatgcaagtaaaacgcgtgttatatcagttacaccctacaaccagagcaacaatgaaggacgtgaagttggaactcagaccacattgtcaatagactgtatcgagatgcaagaactaaaggggaaaaatataatacatccttcaccacgagcatgtgcaagccaaagtactcgggtatctccaccttcatcccggccttcagttcctcgatcatattctcacggtcattttgaaaagaatcagacttcacttgttaataaaatagctgataatgtgttatcaagtccagcaggtagagcactgaactacagttacaatgtacagcgtttagtgcaggaactttcagaaggcagtcatgctggacctccagttaggccggagaggagaaagagtgctcagggcaagaacagtgtaagaagtaagagtgctgataacaagaacgttgaattgcagtggaatccggttgcattgtga(seqidno.3);
ci基因的核苷酸序列如seqidno.4所示:
atgacagcgagacgagcggcgcggcccgcgagtcatcttgtcacactgtcgcctgtctccatggcaaccctcgccgagagtcttcaactatttctagaatttggcccacagtcacttccaactggtggagtgagcggggagggactttccacctacttaccagccccggttatttccggcgagggcaccaacaaacatccataccgaacaccactccaacctaggagccctcgcaacgtaaacatcttgatccagacgccaccaacagcagaagtgagaaaatccacgttagagcattgggactccacggcagcagttaccaacttgtacgtctcagcactgtcacagctattgttgcccagcagtggctcaggttcgaatctctcggagctccaattcctggcggcgtcccggcgcgccgcggcggcagctgcaggggcggtgttgcccccgggggcagctggggccgcgggggccgccggggctgcagggggtggcgtggcagtaccaccaccacccccacatcatcccccgggccccgacttccaccccgcgtacaggctcaacccttacatggagcacctgtactcatctctccagcagcattctagtcctgccgcctctattcacggtttgggtctcccaccggactacctaggctcgcgcgcactgacagagctccagcctcctccttccactatcggtagctcggaaagaaagaaagaagaaagggaagatgatatagaagaaagaaggaagaaaagaaagaaggaagtaagtaaagcaagttccagacttacgagtcctcggccgagcagtttgcgacagagtcggaagagggccctgtcgtcatcgccatattcggactcgttcgacatcaattcgatgatacggttctctccgaactccctcgtctccatcgtgaacggatctcggagctccagtgccagtggttcatacggccacctctcagcaggggctatcagcccggctttgggcatgcaccccagcatggcgccccacctccagcagcttcaagcccaccttctacggactgcggcgggtagtttgctgccccctctgccaccccacccgcaggcacagacccaggccccgggagggctgttttctcttcctcaccatcccttgcagccctccacaggacattccatttctaaaacagagctgtcaggggatgcttgcaagaagctggactcacctgtttctagtagtgtcgtggaggcggacactagtgctcctggtggaatcagttcgcaccaacggaaggcgagaataaagagggaacctgtcactgccaatgccacaacagcgtctgtaggtgctggtgctgtgtccggagcattaggctcagactgcagtagcagtaagtgttcaccaggtggtgctgattctggcgatcctcttaaagatgaacctggcgacttcattgaaaccaactgccattggcgggactgtggacttgagtttcctacacaggacgatctcgtcaagcacatcaacaatgaccacattcatgccaacaagaagtcgtttgtgtgccgctgggaagactgttcaagggacgagaagcccttcaaagcgcagtatatgctggtggtgcacatgcgacgacacacaggggagaagccccacaaatgtacatttgaagggtgctacaaagcctattcgaggctggagaacctgaagacgcacctcagatctcatacaggagaaaaaccctacatgtgtgagtatcctggatgcagcaaagccttcagcaatgcgtccgaccgtgccaaacaccagaaccgcacgcactccaacgagaaaccgtacgtgtgtaaggccccgggctgcaccaagaggtacacagaccccagttcgctgcggaagcacgtgaagacagtgcacggtgccgagttctatgccaacaagaagcacaagggagctggcgacggcgccgaggatggctctggaggggcgggaggcctactggacagcagcccgcacagcgaggagatgatgagcggcaagacggccagtctgtccagccctagtgtcaagtcagaggaggccagttcgcctgcccagcagggaagtcctttgagtgtgactcagcatggcaacaatggtttagatgagccaatcagcgactcaaatgtgagcactaccaaccatgcgttagcagcagtggaggcagcagaagaatgggtggacgaggctgaagaacttgagctgccagagcttcacgtgagggctgtagtgggtggaggggcggaccccattggaccgccagcggaccatactgcacatcgcatgaggcggctgcaagctaaactacctccactaccaaatattgcaggtggccgacgagggattcatcttggcgacctgcataagcatttcactgatctcaaaatggagggctcgaagatctcaggcactgtgacacagacacagctgatagagctgcagattccactgggccctggccagaagcagctgcagcaacaggccaacctacgccgtgacagtaactccaccgtcagcacgtactacggcagcatgcggtcaggagacctgggctccagccgcagaagtagccaggcctcgcaggcttcagcgctgtcttgtgcaaggccaggcagtggccaggtgggctcgtcgtatgacccgatctcagccggcagctcacggaggtccagtcagctgagcaacacgggcggcataagtaccatggggcacctcagcagccacctccagcgcctgcactccagggcgcaggacccactctactgcacatccaacctcgtcctgcagacgcaaaacatgtccctgcaacaacaacggcgtcagcagctgcaacagcagttgtcagggcctggcaactggctgccacaaccaggagccaacaacagctccagcaaccccgtggacaccagacgcatgtcggagccatgcagagggggctctgataggtcaacacccccaccccgtcctcacagcgtggtcctgccgcccatcgcacgagcccaggagcaccaccctaaccaggaggtggtactggatgaagtcgccgaaggggagatggtggagaagaacctcgtgatcccagacgagatgctgcacttcctcagtcaggtgagccacctcacaggacgacattcctatgttattgttgttgttttctaa(seqidno.4)。
根据hh基因、ptc基因、smo基因或/和ci基因的核苷酸序列,应用dna序列比对,设计了一组灵敏度高且特异性强的引物,序列如下:
hh.t7引物:
hhf:5’-taatacgactcactataggttcaaacagcacgtgcccaac-3’(seqidno.5);
hhr:5’-taatacgactcactataggagtggatgtgcgctctggac-3’(seqidno.6);
ptc.t7引物:
ptcf:5’-taatacgactcactatagggacatgtgttactcgcccag-3’(seqidno.7);
ptcr:5’-taatacgactcactataggttagggaccgtcgaacctcc-3’(seqidno.8);
smot7引物:
smof:5’-taatacgactcactataggtgattggcgttctgcaaaca-3’(seqidno.9);
smor:5’-taatacgactcactataggaattcgtacacatgacacaca-3’(seqidno.10);ci.t7引物:
cif:5’-taatacgactcactatagggactgtggacttgagtttcc-3’(seqidno.11);
cir:5’-taatacgactcactataggctctgacttgacactagggc-3’(seqidno.12)。
以美洲大蠊hh、ptc、smo和ci的cdna序列作为模板,分别用引物将相对应的靶序列进行扩增,引物两头都含有t7启动子,将pcr扩增产物克隆到ptopo载体中,分别获得含有hh、ptc、smo和ci靶序列的质粒,即名为ptopo-hh、ptopo-ptc、ptopo-smo和ptopo-ci的质粒。
实施例2dsrna的合成
靶向沉默hh基因的dsrna的制备方法:以ptopo-hh为模板,用两端含有t7启动子的引物seqidno.5和seqidno.6进行pcr扩增,然后将pcr扩增产物通过t7ribomaxtmexpressrnaisystem转录试剂盒(promega)合成dsrna,序列如seqidno.17所示;
靶向沉默ptc基因的dsrna的制备方法:以ptopo-ptc为模板,用两端含有t7启动子的引物seqidno.7和seqidno.8进行pcr扩增,然后以pcr产物为模板使用t7ribomaxtmexpressrnaisystem转录试剂盒(promega)进行dsrna的合成,dsrna的核苷酸序列为seqidno.18;
靶向沉默smo基因的dsrna的制备方法:以ptopo-smo为模板,用两端含有t7启动子的引物seqidno.9和seqidno.10进行pcr扩增,然后以pcr产物为模板使用t7ribomaxtmexpressrnaisystem转录试剂盒(promega)进行dsrna的合成,dsrna的核苷酸序列为seqidno.19;
靶向沉默ci基因的dsrna的制备方法:以ptopo-ci为模板,用两端含有t7启动子的引物seqidno.11和seqidno.12进行pcr扩增,然后以pcr产物为模板使用t7ribomaxtmexpressrnaisystem转录试剂盒(promega)进行dsrna的合成,dsrna的核苷酸序列为seqidno.20。
dsrna靶向沉默的hh基因的核苷酸序列如下所示:
aacacccttccagcaagcggtctcaccgaggggcgcgtgacccgcaaagaccctcgcttcagggatctggtgcccaactacaacgcagacatcgtgttcaaggacgaggaaggcacgggcgccgaccgcctcatgacgcagaggtgcaaggagaagctgaacacgctggccatctcggtgatgaaccagtggcccggcgtgaagctgcgggtgacggagggctgggacgaggaggggcaccacgccgtggactcgctgcactacgagggccgagccgtcgacgtcaccacctccgacagggatcgagccaagtacggcatgctggcgcgcctcgccgtggaggcgggcttcgactggg(seqidno.13);
dsrna靶向沉默的ptc基因的核苷酸序列如下所示:
ttcgacgagcactatatagaccaaatattcctaaacattatcccttgtgccatcattactccattagactgtttttgggaagcttcgaagcttctgggaccagattatcctgttcaaataccaggcgtgggctccaaggtgcgctggacgaaccttaacccacaacaactaatccaacaaatgaagactgtcgaattggtattccctttcgagactctcgaagactacatgaaaagggcggggataagcacgggctaccaagagaagccgtgtctcgacccctccgaccccgaatgcccgaccaccgcccccaacaagttatccggacagatacctgacatcggggcagagctgacaggaggctgctacggatatgcagccaaatatatgcactggcctgaggacctggtggtgggcggagccacacgaaataagactggacacatacaaagggcgcgtgcattgcagactgtggtgcaactaatgggagagagagagatgtatgaattctggtctaaaacgtacaaagtccatcacttggattggacacaagaaaaagctgctttaattctcgagacatggcagaggc(seqidno.14);
dsrna靶向沉默的smo基因的核苷酸序列如下所示:
acttgtaattttctatatcaattgctgttttttggtgtcatgtattggatggttggcacagtttattcctggtgcacgtgaaggcattatatgccggaaagatggtactttaaggatgtcagaacctaatactggagagaatttgtcatgtgtgataatatttgtattggtgtattacttcatcatggctgcctttgtgtggtttgtaattctcacgtacacatggcacatcagttttcaagctctaggtaaaattcaagagcgaattgataagaaaagtgcttattttcacatggtggcttggtcattgcctctagttcttactattacaactatggcactaggggaaatagatggcgacagtgttgctggtatctgttttgtgggatatgttaatcatgctgcacgagcaggattcttgctcgtccccattacaacagtactttttgttggaggatactttctcactaggggtcttataacactggtgagactaaaaattaacagtcaagaaattatctcagaaagagcaagtgccaagataagagaaaccattgtgcgcatgggtctcttttcactgtttacatttgtctttgtgtt(seqidno.15);
dsrna靶向沉默的ci基因的核苷酸序列如下所示:
gatctcgtcaagcacatcaacaatgaccacattcatgccaacaagaagtcgtttgtgtgccgctgggaagactgttcaagggacgagaagcccttcaaagcgcagtatatgctggtggtgcacatgcgacgacacacaggggagaagccccacaaatgtacatttgaagggtgctacaaagcctattcgaggctggagaacctgaagacgcacctcagatctcatacaggagaaaaaccctacatgtgtgagtatcctggatgcagcaaagccttcagcaatgcgtccgaccgtgccaaacaccagaaccgcacgcactccaacgagaaaccgtacgtgtgtaaggccccgggctgcaccaagaggtacacagaccccagttcgctgcggaagcacgtgaagacagtgcacggtgccgagttctatgccaacaagaagcacaagggagctggcgacggcgccgaggatggctctggaggggcgggaggcctactggacagcagcccgcacagcgaggagatgatgagcggcaagacggcc(seqidno.16)。
靶向沉默hh基因的dsrna序列如seqidno.17所示:
aacacccuuccagcaagcggucucaccgaggggcgcgugacccgcaaagacccucgcuucagggaucuggugcccaacuacaacgcagacaucguguucaaggacgaggaaggcacgggcgccgaccgccucaugacgcagaggugcaaggagaagcugaacacgcuggccaucucggugaugaaccaguggcccggcgugaagcugcgggugacggagggcugggacgaggaggggcaccacgccguggacucgcugcacuacgagggccgagccgucgacgucaccaccuccgacagggaucgagccaaguacggcaugcuggcgcgccucgccguggaggcgggcuucgacuggg(seqidno.17);
靶向沉默ptc基因的dsrna序列如seqidno.18所示:
uucgacgagcacuauauagaccaaauauuccuaaacauuaucccuugugccaucauuacuccauuagacuguuuuugggaagcuucgaagcuucugggaccagauuauccuguucaaauaccaggcgugggcuccaaggugcgcuggacgaaccuuaacccacaacaacuaauccaacaaaugaagacugucgaauugguauucccuuucgagacucucgaagacuacaugaaaagggcggggauaagcacgggcuaccaagagaagccgugucucgaccccuccgaccccgaaugcccgaccaccgcccccaacaaguuauccggacagauaccugacaucggggcagagcugacaggaggcugcuacggauaugcagccaaauauaugcacuggccugaggaccugguggugggcggagccacacgaaauaagacuggacacauacaaagggcgcgugcauugcagacuguggugcaacuaaugggagagagagagauguaugaauucuggucuaaaacguacaaaguccaucacuuggauuggacacaagaaaaagcugcuuuaauucucgagacauggcagaggc(seqidno.18);
靶向沉默smo基因的dsrna序列如seqidno.19所示:
acuuguaauuuucuauaucaauugcuguuuuuuggugucauguauuggaugguuggcacaguuuauuccuggugcacgugaaggcauuauaugccggaaagaugguacuuuaaggaugucagaaccuaauacuggagagaauuugucaugugugauaauauuuguauugguguauuacuucaucauggcugccuuugugugguuuguaauucucacguacacauggcacaucaguuuucaagcucuagguaaaauucaagagcgaauugauaagaaaagugcuuauuuucacaugguggcuuggucauugccucuaguucuuacuauuacaacuauggcacuaggggaaauagauggcgacaguguugcugguaucuguuuugugggauauguuaaucaugcugcacgagcaggauucuugcucguccccauuacaacaguacuuuuuguuggaggauacuuucucacuaggggucuuauaacacuggugagacuaaaaauuaacagucaagaaauuaucucagaaagagcaagugccaagauaagagaaaccauugugcgcaugggucucuuuucacuguuuacauuugucuuuguguu(seqidno.19);
靶向沉默ci基因的dsrna序列如seqidno.20所示:
gaucucgucaagcacaucaacaaugaccacauucaugccaacaagaagucguuugugugccgcugggaagacuguucaagggacgagaagcccuucaaagcgcaguauaugcugguggugcacaugcgacgacacacaggggagaagccccacaaauguacauuugaagggugcuacaaagccuauucgaggcuggagaaccugaagacgcaccucagaucucauacaggagaaaaacccuacaugugugaguauccuggaugcagcaaagccuucagcaaugcguccgaccgugccaaacaccagaaccgcacgcacuccaacgagaaaccguacguguguaaggccccgggcugcaccaagagguacacagaccccaguucgcugcggaagcacgugaagacagugcacggugccgaguucuaugccaacaagaagcacaagggagcuggcgacggcgccgaggauggcucuggaggggcgggaggccuacuggacagcagcccgcacagcgaggagaugaugagcggcaagacggcc(seqidno.20)。
实施例3dsrna活体注射影响美洲大蠊断肢再生
为了验证筛选出的hedgehog信号通路中的hh、ptc、smo和ci基因在美洲大蠊断肢再生过程中所发挥的功能,对刚断肢的美洲大蠊进行dsrna注射的方式来实现。采用不靶向美洲大蠊任何基因的ck作为dsrna注射处理的阴性对照。
步骤如下:首先挑选刚蜕皮的美洲大蠊幼虫(d0),继续培养一天使其适应周围环境,然后对其进行第一次dsrna注射(d1),24小时后对美洲大蠊的一侧后肢进行截肢手术处理(d2),就是保留完整的基节和转节,将腿节、胫节和跗节一起剪掉(见图1a),然后在接下来的d4和d7天进行另外两次的dsrna干扰,每次注射3ug。注射步骤如下:将美洲大蠊幼虫麻醉后用胶带固定,然后使用显微注射方法将dsrna溶液注射到美洲大蠊的腹部。注射后持续观察dsrna处理对幼虫断肢再生的影响直到下次蜕皮。
结果发现hh、ptc、smo和ci基因被沉默后都显著影响美洲大蠊的断肢再生能力,新生成的腿无法正常行使爬行功能,分别出现明显畸形或部分缺失,结果如图1b。证明hh、ptc、smo和ci基因和美洲大蠊的断肢再生能力存在关系。
实施例4hedgehog信号通路hh、ptc、smo和ci基因沉默检测
在注射第二次dsrna后的24h检测hh、ptc、smo和ci沉默效率,提取美洲大蠊腿节、胫节和跗节的总rna,每组设置3个生物学重复,并反转录成第一链cdna,然后以此为模板,进行real-timepcr检测目的基因(hh、ptc、smo和ci)和管家基因(β-actin)的相对表达量,使用2-△△ct法计算目的基因(hh、ptc、smo和ci)的沉默效率。
以β-actin做内参。所用qrt-pcr引物为:
hh:
hhqpcrf:5’-gagtccagagcgcacatcca-3’(seqidno.21);
hhqpcrr:5’-tcctccgagaagcagccacc-3’(seqidno.22);
ptc.:
ptcqpcrf:5’-atgcgtttctgagtgcg-3’(seqidno.23);
ptcqpcrr:5’-gtaatttctgattggtggg-3’(seqidno.24);
smo:
smoqpcrf:5’-gtaagatccgcaaggt-3’(seqidno.25);
smoqpcrr:5’-cgtctgatggtggtaat-3’(seqidno.26);
ci.:
ciqpcrf:5’-aatggagggctcgaagat-3’(seqidno.27);
ciqpcrr:5’-tactgtcacggcgtaggtt-3’(seqidno.28)。
结果如图2所示,结果发现dsrna注射后,可以明显降低hh、ptc、smo和ci基因的表达量,达到沉默hh、ptc、smo和ci基因的目的。
综上所述,蟑螂断肢再生的一个重要过程就是再生腿的塑型,而hedgehog信号通路包括多个重要的成形素基因,如hh、ptc、smo和ci等,该通路某个基因的缺失将使得蟑螂无法进行正常的附肢再生,影响其正常行走能力,利用其重要生物学功能来进行害虫防治,省时省力,安全高效。dsrna注射到美洲大蠊的体腔,结果表明合成的dsrna可以特异性地沉默美洲大蠊hh、ptc、smo和ci基因的mrna表达,并导致美洲大蠊出现断肢再生。
以上所述仅为本发明的较佳实施例而已,并不用以限制本发明,凡在本发明的精神和原则之内所作的任何修改、等同替换和改进等,均应包含本发明的保护范围之内。
sequencelisting
<110>华南师范大学
<120>美洲大蠊断肢再生相关hedgehog信号通路基因及其dsrna的应用
<130>
<160>28
<170>patentinversion3.5
<210>1
<211>831
<212>dna
<213>人工序列
<400>1
atgagggcgggggcgctgatgtggggggcgctgctgctgctggcggcgtcggcgtcgggc60
tgcgggcccggacgagggggagggcgccgtcccgtgccccgcaagttgacccccctcgtg120
ttcaaacagcacgtgcccaacgtaagcgaaaacacccttccagcaagcggtctcaccgag180
gggcgcgtgacccgcaaagaccctcgcttcagggatctggtgcccaactacaacgcagac240
atcgtgttcaaggacgaggaaggcacgggcgccgaccgcctcatgacgcagaggtgcaag300
gagaagctgaacacgctggccatctcggtgatgaaccagtggcccggcgtgaagctgcgg360
gtgacggagggctgggacgaggaggggcaccacgccgtggactcgctgcactacgagggc420
cgagccgtcgacgtcaccacctccgacagggatcgagccaagtacggcatgctggcgcgc480
ctcgccgtggaggcgggcttcgactgggtgtactacgagtccagagcgcacatccactgc540
tccgtcaagtcggagtcgtcgcaagcggccaagtcgggtggctgcttctcggaggagacg600
accgtcgagacgtcgagcggcgcgcgtgtgcgcctggccgacctgcgagtcggagatcgc660
gtcctggcgctggacctggcgtcgggacgcctcacgtacagcgaagttgatgcagggagt720
gttcgcgccactcacgcgagagggcaccatcgtcgcggacggcgtcgtggcgtcgtgcta780
cgcggtggtggacagtcagtggctcgcacacctcacctacgcgccttttag831
<210>2
<211>3540
<212>dna
<213>人工序列
<400>2
attacttggagtctaaaagacatgtgttactcgcccagtattcctgacttcgacgagcac60
tatatagaccaaatattcctaaacattatcccttgtgccatcattactccattagactgt120
ttttgggaagcttcgaagcttctgggaccagattatcctgttcaaataccaggcgtgggc180
tccaaggtgcgctggacgaaccttaacccacaacaactaatccaacaaatgaagactgtc240
gaattggtattccctttcgagactctcgaagactacatgaaaagggcggggataagcacg300
ggctaccaagagaagccgtgtctcgacccctccgaccccgaatgcccgaccaccgccccc360
aacaagttatccggacagatacctgacatcggggcagagctgacaggaggctgctacgga420
tatgcagccaaatatatgcactggcctgaggacctggtggtgggcggagccacacgaaat480
aagactggacacatacaaagggcgcgtgcattgcagactgtggtgcaactaatgggagag540
agagagatgtatgaattctggtctaaaacgtacaaagtccatcacttggattggacacaa600
gaaaaagctgctttaattctcgagacatggcagaggcgattttcagaggaggttcgacgg660
tccctaacaactgataatagcacggcatcttacaacatgtatgcattctcgactgtaaca720
ttaaacgatatactaagtcaattttcagagctaagcgtagtcaaagttgttgtcggatat780
atttttatgttggcatatgcaggagtctctctcctcaggtggcacgatccagttcgttca840
caagctggtgtggggcttgctggagtactcttggtgtccatcacagtcgcagcaggtctt900
gggttctgtgctctgctgggcattgccttcaatgcttccaccacacaaattgtgccattc960
ctcgcattgggccttggtgtcgatgatatgttcttgttgacacatacatatgcagagcag1020
gaacaaggccagggaggttctcacaatcagtaccaacctgacgaacagaccggtgttgtg1080
ctcaagaggactggactcagtatcctcctcacctcactcagcaacatatgcgctttcttt1140
gctgctgccatcatccccatcccagcactgcgggtcttctcgttacaggctgcagtgctg1200
gtaatgttcaacctgggctgcacgctgctcgtcttcccagcagtggtcagtctcgattta1260
agaagaagacggtcaggccgtgtggacattctatgctgctgcctgcctgggggtcccaca1320
ggctctgaatggccttgctgtactctgcctaacgtcccaacaggccatctcgttcacgtg1380
cctagaagacggagagggcaggttgtgccagaacctccaaggatgctccaaacaatcacg1440
agagctctgccccccgacagacagcagactgttactgtgctggcacagccggcagctcct1500
acacagccgcagacacccgaatgctgggtagggtccacaagagaactgttaacgctagat1560
cctgagagggggcagggagctgttggaggttgtggcggccatcacatcatgcacgaatgt1620
tggagttggtcactcacaaggctagcagctacgcattatgcacctcttatcaccaaatca1680
ccagtgaaggttgtgtcgatggtggtgctggtggtgatcctggcaggaagcgtttggggc1740
attaccaaagtcacggacggcctggacttaactgacatagtccctcagaacacagacgag1800
catgcgtttctgagtgcgcagggtcggttcttcggcttctacaacatgtatgccgtgacg1860
cagggtgactttgagtaccccaccaatcagaaattactgtatgaataccatgaggcattc1920
atgcgcgtccctaacatcatcaagaacgatgatggtggtcttccagagttctggctcagt1980
cttttccgggactggcttataggactccagaaggctttcgaccgagactggtctcggggg2040
agtattacacaggaacggtggttctctaacgcatcagatgaggggatccttgcctacaag2100
ctgctggttcagactgggcatgtcgacaaccccatcgacaagtcacttattactcaggtt2160
aggctggttgatgcagaaggaatcatcaatcctaaagctttctacaactacctcagtgcc2220
tgggcatctaatgatgctttggcatacggagcttcgcaggcaaacctgcgaccagagcca2280
aaatcctggtaccacgctacaaaagacttcgagctcaagatacccaagtccgcacctctg2340
gtgtacacccagctgcctttctatttacacggcctgggtgacacacaacacatcactaat2400
cttattgctcaggtgcgggcgttgtgtcagaagttcgaagagcgaggactccccaacttt2460
ccctcagggattcccttcctcttctgggagcaatacctcgggctacggcagtcgctgggt2520
ctggctttgctctgtgcattagctgcagtcttcctggtggtggctgtattgttgctcaat2580
ctgtgggctgcgaccctagtggtgctggccctggcagccatggtgcttcagctgcttgga2640
gtcatgggggccctcggaatcaagctcagtgcaatacctgctgtcctccttattgttgct2700
gtgggcatcggcgtccacttcacagtacacatctgcctggggtttgtgacaagcatagga2760
ggaagagatcgacggacacgtctcgcattggagcagatgtttgcccctgtcactcacgga2820
gccctcacgacactgcttggtatctttatgctggccttttcagagtttgacttcattgtg2880
aggtatttcttctacgtgctgcttgctctagtggtcgttggtctccttactggtctagtc2940
ttctttccagttttgctgtcgctaataggaccagctgccgaggttgtaccacatgagttc3000
cctgatcgcatttcgacacctacacctcctccatctcctgtgaggacgaggattggttca3060
tgtcgggtagggaaggctccaccacagcccaggagaggtcacgggggtatgcagtgcaac3120
cgcttacatgcagagccatccctcacgaccatcacagaggaagcgaactcatggcactca3180
actcatgagattgttgtacagcctgagctggtggtcgagactaccacttatggaacgcct3240
cagactgcaagtcaaactacgggaggcagtggtgaaggttctggagcaggtcagacctcg3300
acatctccccctcctcctccagggtctcagtcacacgtcaccacaaaggttacagccaca3360
actctcgtcaaggttgaggtccacgcaccactgccaggagctgttgaacgtgatttggga3420
agcagcagtagcagcaataagagtcgctcaagtcgtcggagagactcaagctcgggatcc3480
gaccacgattcttcttcagataacaactcaggcaaacaaggtggtaccaccgcttcctag3540
<210>3
<211>3501
<212>dna
<213>人工序列
<400>3
atgaagatcttacataaggaaattatctatttaaaaaaatttcggctggcaatgcaagga60
ttttttgcatcgaagttcgtcgtcttcgtattaactgctattattgagcctcttcatgtc120
gtgggagaatttagaggaaatgtgactgttttagtaagatccgcaaggtatgaaggagat180
catgcattccttcgggacaaattttcatcagctgattccatcatattaccaccatcagac240
gggaaaggaccgtactgcagacacccagctcgttgtgaacaacttaattatacaacctgc300
atgggagttaaacttccttatacatctactacacttgatttggtggaaaatttaggtaca360
caggaactcgtacaggaaaaattacaacagtggcaaggattacgtcacattccgaaatgt420
tggactgtcgttcaaccatttctctgtgctttatacatgcccaaatgtgagaatgggaca480
gtggatctgccatcacaggaaatgtgcaaaatgacagtgggcccatgtcgaatactggaa540
tcttacaaaagttggccatcgttcttcagatgtgacgacacagttagatttccaccaatg600
tgtaagaatgatgcccgagagctgaagtacaatactactagtcagtgccagagtcctttg660
gtgccaactgacaatactctagcattctatgatggaatagaaggatgtggcattcagtgc720
caaaatccattgcttacagaagacgaacatagacagatccatcagttaattgcttgggca780
ggaaccatttgccttctttttaatatcttcacagtggtaacctttttcattgattggcgt840
tctgcaaacaagtatccagcacttgtaattttctatatcaattgctgttttttggtgtca900
tgtattggatggttggcacagtttattcctggtgcacgtgaaggcattatatgccggaaa960
gatggtactttaaggatgtcagaacctaatactggagagaatttgtcatgtgtgataata1020
tttgtattggtgtattacttcatcatggctgcctttgtgtggtttgtaattctcacgtac1080
acatggcacatcagttttcaagctctaggtaaaattcaagagcgaattgataagaaaagt1140
gcttattttcacatggtggcttggtcattgcctctagttcttactattacaactatggca1200
ctaggggaaatagatggcgacagtgttgctggtatctgttttgtgggatatgttaatcat1260
gctgcacgagcaggattcttgctcgtccccattacaacagtactttttgttggaggatac1320
tttctcactaggggtcttataacactggtgagactaaaaattaacagtcaagaaattatc1380
tcagaaagagcaagtgccaagataagagaaaccattgtgcgcatgggtctcttttcactg1440
tttacatttgtctttgtgttggtgacctttgtgtgtcatgtgtacgaatttcatcatcac1500
agtgactggagagaaagtttcagaaaattcatagtttgccgaattatgagcagtggtaat1560
gcagacacaaagagatgtaagatagagtctcgaccaagtctctcaatgatgcaactgcat1620
atattggtgatgttcttggcaggtgtcataatgtcatcatgggtatggacgagctccaca1680
gttgacacctggagaagatgtctcagaaggacttttaatactcaagcagaagaacccgtc1740
agattgaagaagcataaagttattgctcaagcatttgcaaaaaggaagacattcaacaat1800
gcaggtcgcctctccattagttttcatagcacccatgaggatcctgtaggtttaaatttt1860
gatatgaacagtattgcatcacaagacttcagctcaacctgggcagcagcattaccgaag1920
ctgatgacacgacgtggtgctcttattggtgttgccactggctcaaactcaagccagcat1980
cgaaactcgatagactccgaaatcagttacagtgtgagaagggtgtcagttgaatcacgt2040
cgccactcattggactcccaagtgtctgtacagattgctgaagtaacagcaacacgaaaa2100
gctgcagccactcctatgcctgcagcaagtactgcaactgtgtctggtggaaggggcaga2160
aaaactcgcagtcgaagacaaagaagagagtttggacgtattcgaagtagtcgtgtggga2220
cctcttttgattaggagaggcagtacaacatcacaagaaagtcagttaggagcacaaatt2280
ctgtcagcacttactctagcaaatacaactcttccatcatttgttcccaatctaaagaaa2340
cgaaggactggcaatgcaggtttggacagctctaaagtcattctgccattcgccctgcca2400
gatcagagtcttgatgtaagtgatgaagaacaaaacagtgatgagaagatttctgggaca2460
ataaaaaaatttgatatctttctttgtagagaagctaatgatgtggatttggaggatatt2520
aatgacagtgatggggagatcagtgatggaatgccagcagaaaacgatatgaaagttgta2580
atagcaagtaagtttaatgaagatgagaatgatgacagaaatgatgatattaataataaa2640
cggaaaaacagaagtaccgaaattaatgcaaacactgtaagtgcaaatgatggcatccat2700
attgaggaagatcagaaaaattccattgttgatatgggttcccatcatagtataagtgca2760
gaagttgatgattatcgaagtagaacttcagagggaaacaggtatagaaataactatggc2820
gattgtaaaaacataaatatacctgatgaagtgaaattgtatcttacagaaggctctgat2880
gatgaacctccacaaaaattgaatttcgttccttctgtagatattggaggtgtttcagat2940
ggttccacatcattttgtcctgagctttctcatctagttgtgcagtcctcccattcaggt3000
ctgtcacaaggaagccctcataactttgatgcaagtaaaacgcgtgttatatcagttaca3060
ccctacaaccagagcaacaatgaaggacgtgaagttggaactcagaccacattgtcaata3120
gactgtatcgagatgcaagaactaaaggggaaaaatataatacatccttcaccacgagca3180
tgtgcaagccaaagtactcgggtatctccaccttcatcccggccttcagttcctcgatca3240
tattctcacggtcattttgaaaagaatcagacttcacttgttaataaaatagctgataat3300
gtgttatcaagtccagcaggtagagcactgaactacagttacaatgtacagcgtttagtg3360
caggaactttcagaaggcagtcatgctggacctccagttaggccggagaggagaaagagt3420
gctcagggcaagaacagtgtaagaagtaagagtgctgataacaagaacgttgaattgcag3480
tggaatccggttgcattgtga3501
<210>4
<211>3192
<212>dna
<213>人工序列
<400>4
atgacagcgagacgagcggcgcggcccgcgagtcatcttgtcacactgtcgcctgtctcc60
atggcaaccctcgccgagagtcttcaactatttctagaatttggcccacagtcacttcca120
actggtggagtgagcggggagggactttccacctacttaccagccccggttatttccggc180
gagggcaccaacaaacatccataccgaacaccactccaacctaggagccctcgcaacgta240
aacatcttgatccagacgccaccaacagcagaagtgagaaaatccacgttagagcattgg300
gactccacggcagcagttaccaacttgtacgtctcagcactgtcacagctattgttgccc360
agcagtggctcaggttcgaatctctcggagctccaattcctggcggcgtcccggcgcgcc420
gcggcggcagctgcaggggcggtgttgcccccgggggcagctggggccgcgggggccgcc480
ggggctgcagggggtggcgtggcagtaccaccaccacccccacatcatcccccgggcccc540
gacttccaccccgcgtacaggctcaacccttacatggagcacctgtactcatctctccag600
cagcattctagtcctgccgcctctattcacggtttgggtctcccaccggactacctaggc660
tcgcgcgcactgacagagctccagcctcctccttccactatcggtagctcggaaagaaag720
aaagaagaaagggaagatgatatagaagaaagaaggaagaaaagaaagaaggaagtaagt780
aaagcaagttccagacttacgagtcctcggccgagcagtttgcgacagagtcggaagagg840
gccctgtcgtcatcgccatattcggactcgttcgacatcaattcgatgatacggttctct900
ccgaactccctcgtctccatcgtgaacggatctcggagctccagtgccagtggttcatac960
ggccacctctcagcaggggctatcagcccggctttgggcatgcaccccagcatggcgccc1020
cacctccagcagcttcaagcccaccttctacggactgcggcgggtagtttgctgccccct1080
ctgccaccccacccgcaggcacagacccaggccccgggagggctgttttctcttcctcac1140
catcccttgcagccctccacaggacattccatttctaaaacagagctgtcaggggatgct1200
tgcaagaagctggactcacctgtttctagtagtgtcgtggaggcggacactagtgctcct1260
ggtggaatcagttcgcaccaacggaaggcgagaataaagagggaacctgtcactgccaat1320
gccacaacagcgtctgtaggtgctggtgctgtgtccggagcattaggctcagactgcagt1380
agcagtaagtgttcaccaggtggtgctgattctggcgatcctcttaaagatgaacctggc1440
gacttcattgaaaccaactgccattggcgggactgtggacttgagtttcctacacaggac1500
gatctcgtcaagcacatcaacaatgaccacattcatgccaacaagaagtcgtttgtgtgc1560
cgctgggaagactgttcaagggacgagaagcccttcaaagcgcagtatatgctggtggtg1620
cacatgcgacgacacacaggggagaagccccacaaatgtacatttgaagggtgctacaaa1680
gcctattcgaggctggagaacctgaagacgcacctcagatctcatacaggagaaaaaccc1740
tacatgtgtgagtatcctggatgcagcaaagccttcagcaatgcgtccgaccgtgccaaa1800
caccagaaccgcacgcactccaacgagaaaccgtacgtgtgtaaggccccgggctgcacc1860
aagaggtacacagaccccagttcgctgcggaagcacgtgaagacagtgcacggtgccgag1920
ttctatgccaacaagaagcacaagggagctggcgacggcgccgaggatggctctggaggg1980
gcgggaggcctactggacagcagcccgcacagcgaggagatgatgagcggcaagacggcc2040
agtctgtccagccctagtgtcaagtcagaggaggccagttcgcctgcccagcagggaagt2100
cctttgagtgtgactcagcatggcaacaatggtttagatgagccaatcagcgactcaaat2160
gtgagcactaccaaccatgcgttagcagcagtggaggcagcagaagaatgggtggacgag2220
gctgaagaacttgagctgccagagcttcacgtgagggctgtagtgggtggaggggcggac2280
cccattggaccgccagcggaccatactgcacatcgcatgaggcggctgcaagctaaacta2340
cctccactaccaaatattgcaggtggccgacgagggattcatcttggcgacctgcataag2400
catttcactgatctcaaaatggagggctcgaagatctcaggcactgtgacacagacacag2460
ctgatagagctgcagattccactgggccctggccagaagcagctgcagcaacaggccaac2520
ctacgccgtgacagtaactccaccgtcagcacgtactacggcagcatgcggtcaggagac2580
ctgggctccagccgcagaagtagccaggcctcgcaggcttcagcgctgtcttgtgcaagg2640
ccaggcagtggccaggtgggctcgtcgtatgacccgatctcagccggcagctcacggagg2700
tccagtcagctgagcaacacgggcggcataagtaccatggggcacctcagcagccacctc2760
cagcgcctgcactccagggcgcaggacccactctactgcacatccaacctcgtcctgcag2820
acgcaaaacatgtccctgcaacaacaacggcgtcagcagctgcaacagcagttgtcaggg2880
cctggcaactggctgccacaaccaggagccaacaacagctccagcaaccccgtggacacc2940
agacgcatgtcggagccatgcagagggggctctgataggtcaacacccccaccccgtcct3000
cacagcgtggtcctgccgcccatcgcacgagcccaggagcaccaccctaaccaggaggtg3060
gtactggatgaagtcgccgaaggggagatggtggagaagaacctcgtgatcccagacgag3120
atgctgcacttcctcagtcaggtgagccacctcacaggacgacattcctatgttattgtt3180
gttgttttctaa3192
<210>5
<211>40
<212>dna
<213>人工引物
<400>5
taatacgactcactataggttcaaacagcacgtgcccaac40
<210>6
<211>39
<212>dna
<213>人工引物
<400>6
taatacgactcactataggagtggatgtgcgctctggac39
<210>7
<211>39
<212>dna
<213>人工引物
<400>7
taatacgactcactatagggacatgtgttactcgcccag39
<210>8
<211>39
<212>dna
<213>人工引物
<400>8
taatacgactcactataggttagggaccgtcgaacctcc39
<210>9
<211>39
<212>dna
<213>人工引物
<400>9
taatacgactcactataggtgattggcgttctgcaaaca39
<210>10
<211>40
<212>dna
<213>人工引物
<400>10
taatacgactcactataggaattcgtacacatgacacaca40
<210>11
<211>39
<212>dna
<213>人工引物
<400>11
taatacgactcactatagggactgtggacttgagtttcc39
<210>12
<211>39
<212>dna
<213>人工引物
<400>12
taatacgactcactataggctctgacttgacactagggc39
<210>13
<211>358
<212>dna
<213>人工序列
<400>13
aacacccttccagcaagcggtctcaccgaggggcgcgtgacccgcaaagaccctcgcttc60
agggatctggtgcccaactacaacgcagacatcgtgttcaaggacgaggaaggcacgggc120
gccgaccgcctcatgacgcagaggtgcaaggagaagctgaacacgctggccatctcggtg180
atgaaccagtggcccggcgtgaagctgcgggtgacggagggctgggacgaggaggggcac240
cacgccgtggactcgctgcactacgagggccgagccgtcgacgtcaccacctccgacagg300
gatcgagccaagtacggcatgctggcgcgcctcgccgtggaggcgggcttcgactggg358
<210>14
<211>589
<212>dna
<213>人工序列
<400>14
ttcgacgagcactatatagaccaaatattcctaaacattatcccttgtgccatcattact60
ccattagactgtttttgggaagcttcgaagcttctgggaccagattatcctgttcaaata120
ccaggcgtgggctccaaggtgcgctggacgaaccttaacccacaacaactaatccaacaa180
atgaagactgtcgaattggtattccctttcgagactctcgaagactacatgaaaagggcg240
gggataagcacgggctaccaagagaagccgtgtctcgacccctccgaccccgaatgcccg300
accaccgcccccaacaagttatccggacagatacctgacatcggggcagagctgacagga360
ggctgctacggatatgcagccaaatatatgcactggcctgaggacctggtggtgggcgga420
gccacacgaaataagactggacacatacaaagggcgcgtgcattgcagactgtggtgcaa480
ctaatgggagagagagagatgtatgaattctggtctaaaacgtacaaagtccatcacttg540
gattggacacaagaaaaagctgctttaattctcgagacatggcagaggc589
<210>15
<211>600
<212>dna
<213>人工序列
<400>15
acttgtaattttctatatcaattgctgttttttggtgtcatgtattggatggttggcaca60
gtttattcctggtgcacgtgaaggcattatatgccggaaagatggtactttaaggatgtc120
agaacctaatactggagagaatttgtcatgtgtgataatatttgtattggtgtattactt180
catcatggctgcctttgtgtggtttgtaattctcacgtacacatggcacatcagttttca240
agctctaggtaaaattcaagagcgaattgataagaaaagtgcttattttcacatggtggc300
ttggtcattgcctctagttcttactattacaactatggcactaggggaaatagatggcga360
cagtgttgctggtatctgttttgtgggatatgttaatcatgctgcacgagcaggattctt420
gctcgtccccattacaacagtactttttgttggaggatactttctcactaggggtcttat480
aacactggtgagactaaaaattaacagtcaagaaattatctcagaaagagcaagtgccaa540
gataagagaaaccattgtgcgcatgggtctcttttcactgtttacatttgtctttgtgtt600
<210>16
<211>540
<212>dna
<213>人工序列
<400>16
gatctcgtcaagcacatcaacaatgaccacattcatgccaacaagaagtcgtttgtgtgc60
cgctgggaagactgttcaagggacgagaagcccttcaaagcgcagtatatgctggtggtg120
cacatgcgacgacacacaggggagaagccccacaaatgtacatttgaagggtgctacaaa180
gcctattcgaggctggagaacctgaagacgcacctcagatctcatacaggagaaaaaccc240
tacatgtgtgagtatcctggatgcagcaaagccttcagcaatgcgtccgaccgtgccaaa300
caccagaaccgcacgcactccaacgagaaaccgtacgtgtgtaaggccccgggctgcacc360
aagaggtacacagaccccagttcgctgcggaagcacgtgaagacagtgcacggtgccgag420
ttctatgccaacaagaagcacaagggagctggcgacggcgccgaggatggctctggaggg480
gcgggaggcctactggacagcagcccgcacagcgaggagatgatgagcggcaagacggcc540
<210>17
<211>358
<212>dna
<213>人工序列
<400>17
aacacccuuccagcaagcggucucaccgaggggcgcgugacccgcaaagacccucgcuuc60
agggaucuggugcccaacuacaacgcagacaucguguucaaggacgaggaaggcacgggc120
gccgaccgccucaugacgcagaggugcaaggagaagcugaacacgcuggccaucucggug180
augaaccaguggcccggcgugaagcugcgggugacggagggcugggacgaggaggggcac240
cacgccguggacucgcugcacuacgagggccgagccgucgacgucaccaccuccgacagg300
gaucgagccaaguacggcaugcuggcgcgccucgccguggaggcgggcuucgacuggg358
<210>18
<211>589
<212>dna
<213>人工序列
<400>18
uucgacgagcacuauauagaccaaauauuccuaaacauuaucccuugugccaucauuacu60
ccauuagacuguuuuugggaagcuucgaagcuucugggaccagauuauccuguucaaaua120
ccaggcgugggcuccaaggugcgcuggacgaaccuuaacccacaacaacuaauccaacaa180
augaagacugucgaauugguauucccuuucgagacucucgaagacuacaugaaaagggcg240
gggauaagcacgggcuaccaagagaagccgugucucgaccccuccgaccccgaaugcccg300
accaccgcccccaacaaguuauccggacagauaccugacaucggggcagagcugacagga360
ggcugcuacggauaugcagccaaauauaugcacuggccugaggaccugguggugggcgga420
gccacacgaaauaagacuggacacauacaaagggcgcgugcauugcagacuguggugcaa480
cuaaugggagagagagagauguaugaauucuggucuaaaacguacaaaguccaucacuug540
gauuggacacaagaaaaagcugcuuuaauucucgagacauggcagaggc589
<210>19
<211>600
<212>dna
<213>人工序列
<400>19
acuuguaauuuucuauaucaauugcuguuuuuuggugucauguauuggaugguuggcaca60
guuuauuccuggugcacgugaaggcauuauaugccggaaagaugguacuuuaaggauguc120
agaaccuaauacuggagagaauuugucaugugugauaauauuuguauugguguauuacuu180
caucauggcugccuuugugugguuuguaauucucacguacacauggcacaucaguuuuca240
agcucuagguaaaauucaagagcgaauugauaagaaaagugcuuauuuucacaugguggc300
uuggucauugccucuaguucuuacuauuacaacuauggcacuaggggaaauagauggcga360
caguguugcugguaucuguuuugugggauauguuaaucaugcugcacgagcaggauucuu420
gcucguccccauuacaacaguacuuuuuguuggaggauacuuucucacuaggggucuuau480
aacacuggugagacuaaaaauuaacagucaagaaauuaucucagaaagagcaagugccaa540
gauaagagaaaccauugugcgcaugggucucuuuucacuguuuacauuugucuuuguguu600
<210>20
<211>540
<212>dna
<213>人工序列
<400>20
gaucucgucaagcacaucaacaaugaccacauucaugccaacaagaagucguuugugugc60
cgcugggaagacuguucaagggacgagaagcccuucaaagcgcaguauaugcugguggug120
cacaugcgacgacacacaggggagaagccccacaaauguacauuugaagggugcuacaaa180
gccuauucgaggcuggagaaccugaagacgcaccucagaucucauacaggagaaaaaccc240
uacaugugugaguauccuggaugcagcaaagccuucagcaaugcguccgaccgugccaaa300
caccagaaccgcacgcacuccaacgagaaaccguacguguguaaggccccgggcugcacc360
aagagguacacagaccccaguucgcugcggaagcacgugaagacagugcacggugccgag420
uucuaugccaacaagaagcacaagggagcuggcgacggcgccgaggauggcucuggaggg480
gcgggaggccuacuggacagcagcccgcacagcgaggagaugaugagcggcaagacggcc540
<210>21
<211>20
<212>dna
<213>人工引物
<400>21
gagtccagagcgcacatcca20
<210>22
<211>20
<212>dna
<213>人工引物
<400>22
tcctccgagaagcagccacc20
<210>23
<211>17
<212>dna
<213>人工引物
<400>23
atgcgtttctgagtgcg17
<210>24
<211>19
<212>dna
<213>人工引物
<400>24
gtaatttctgattggtggg19
<210>25
<211>16
<212>dna
<213>人工引物
<400>25
gtaagatccgcaaggt16
<210>26
<211>17
<212>dna
<213>人工引物
<400>26
cgtctgatggtggtaat17
<210>27
<211>18
<212>dna
<213>人工引物
<400>27
aatggagggctcgaagat18
<210>28
<211>19
<212>dna
<213>人工引物
<400>28
tactgtcacggcgtaggtt19