一种高通量基因表达谱检测试剂盒的制作方法

文档序号:20684658发布日期:2020-05-08 18:43阅读:来源:国知局

技术特征:

1.一种高通量基因表达谱检测试剂盒,其特征在于:该试剂盒包括逆转录反应模块、核酸纯化模块、双链cdna合成模块、测序文库构建模块;

该逆转录反应模块,包括细胞裂解液、逆转录mix、barcode板、备用96孔板;其中:

细胞裂解液:用pbs配置的0.3%triton-100;

逆转录mix:0.5μldntp,0.25μl逆转录酶,1μl5×逆转录酶buffer[250mmtris-hcl(ph8.3),375mmkcl,15mmmgcl2],0.125μldtt,0.125μlrna酶抑制剂,1μlbetaine(5m),0.045μlmgcl2;

barcode板:含96种不同标签的逆转录引物(浓度为20μm):(5’—3’)

acactctttccctacacgacgctcttccgatctctcacatttttttttttttttttttttttttttttt(seqidno:1)

acactctttccctacacgacgctcttccgatcttactgctttttttttttttttttttttttttttttt(seqidno:2)

acactctttccctacacgacgctcttccgatctatcagctttttttttttttttttttttttttttttt(seqidno:3)

acactctttccctacacgacgctcttccgatctcgactatttttttttttttttttttttttttttttt(seqidno:4)

acactctttccctacacgacgctcttccgatctcgtcattttttttttttttttttttttttttttttt(seqidno:5)

acactctttccctacacgacgctcttccgatctctcgattttttttttttttttttttttttttttttt(seqidno:6)

acactctttccctacacgacgctcttccgatcttagcactttttttttttttttttttttttttttttt(seqidno:7)

acactctttccctacacgacgctcttccgatcttctagctttttttttttttttttttttttttttttt(seqidno:8)

acactctttccctacacgacgctcttccgatctcacgtatttttttttttttttttttttttttttttt(seqidno:9)

acactctttccctacacgacgctcttccgatctatgctctttttttttttttttttttttttttttttt(seqidno:10)

acactctttccctacacgacgctcttccgatctgctacatttttttttttttttttttttttttttttt(seqidno:11)

acactctttccctacacgacgctcttccgatctgcatcttttttttttttttttttttttttttttttt(seqidno:12)

acactctttccctacacgacgctcttccgatctacatgctttttttttttttttttttttttttttttt(seqidno:13)

acactctttccctacacgacgctcttccgatctacgtcatttttttttttttttttttttttttttttt(seqidno:14)

acactctttccctacacgacgctcttccgatctcatgcttttttttttttttttttttttttttttttt(seqidno:15)

acactctttccctacacgacgctcttccgatctctagtctttttttttttttttttttttttttttttt(seqidno:16)

acactctttccctacacgacgctcttccgatcttgcatctttttttttttttttttttttttttttttt(seqidno:17)

acactctttccctacacgacgctcttccgatctcatctgtttttttttttttttttttttttttttttt(seqidno:18)

acactctttccctacacgacgctcttccgatctcagatctttttttttttttttttttttttttttttt(seqidno:19)

acactctttccctacacgacgctcttccgatctagcacttttttttttttttttttttttttttttttt(seqidno:20)

acactctttccctacacgacgctcttccgatctactcgatttttttttttttttttttttttttttttt(seqidno:21)

acactctttccctacacgacgctcttccgatcttcacgttttttttttttttttttttttttttttttt(seqidno:22)

acactctttccctacacgacgctcttccgatctgtctactttttttttttttttttttttttttttttt(seqidno:23)

acactctttccctacacgacgctcttccgatcttctcagtttttttttttttttttttttttttttttt(seqidno:24)

acactctttccctacacgacgctcttccgatcttcagactttttttttttttttttttttttttttttt(seqidno:25)

acactctttccctacacgacgctcttccgatctgactcatttttttttttttttttttttttttttttt(seqidno:26)

acactctttccctacacgacgctcttccgatctcacagttttttttttttttttttttttttttttttt(seqidno:27)

acactctttccctacacgacgctcttccgatctacactgtttttttttttttttttttttttttttttt(seqidno:28)

acactctttccctacacgacgctcttccgatctgcagtatttttttttttttttttttttttttttttt(seqidno:29)

acactctttccctacacgacgctcttccgatctgctgattttttttttttttttttttttttttttttt(seqidno:30)

acactctttccctacacgacgctcttccgatcttagtcgtttttttttttttttttttttttttttttt(seqidno:31)

acactctttccctacacgacgctcttccgatctatgacgtttttttttttttttttttttttttttttt(seqidno:32)

acactctttccctacacgacgctcttccgatctcgatgttttttttttttttttttttttttttttttt(seqidno:33)

acactctttccctacacgacgctcttccgatctagatcgtttttttttttttttttttttttttttttt(seqidno:34)

acactctttccctacacgacgctcttccgatcttacgagtttttttttttttttttttttttttttttt(seqidno:35)

acactctttccctacacgacgctcttccgatctcgtagatttttttttttttttttttttttttttttt(seqidno:36)

acactctttccctacacgacgctcttccgatcttgtacgtttttttttttttttttttttttttttttt(seqidno:37)

acactctttccctacacgacgctcttccgatctatcgtgtttttttttttttttttttttttttttttt(seqidno:38)

acactctttccctacacgacgctcttccgatctgtgcattttttttttttttttttttttttttttttt(seqidno:39)

acactctttccctacacgacgctcttccgatctgagctatttttttttttttttttttttttttttttt(seqidno:40)

acactctttccctacacgacgctcttccgatctctcacaatttttttttttttttttttttttttttttt(seqidno:41)

acactctttccctacacgacgctcttccgatcttactgcatttttttttttttttttttttttttttttt(seqidno:42)

acactctttccctacacgacgctcttccgatctatcagcatttttttttttttttttttttttttttttt(seqidno:43)

acactctttccctacacgacgctcttccgatctcgactaatttttttttttttttttttttttttttttt(seqidno:44)

acactctttccctacacgacgctcttccgatctcgtcaattttttttttttttttttttttttttttttt(seqidno:45)

acactctttccctacacgacgctcttccgatctctcgaattttttttttttttttttttttttttttttt(seqidno:46)

acactctttccctacacgacgctcttccgatcttagcacatttttttttttttttttttttttttttttt(seqidno:47)

acactctttccctacacgacgctcttccgatcttctagcatttttttttttttttttttttttttttttt(seqidno:48)

acactctttccctacacgacgctcttccgatctcacgtaatttttttttttttttttttttttttttttt(seqidno:49)

acactctttccctacacgacgctcttccgatctatgctcatttttttttttttttttttttttttttttt(seqidno:50)

acactctttccctacacgacgctcttccgatctgctacaatttttttttttttttttttttttttttttt(seqidno:51)

acactctttccctacacgacgctcttccgatctgcatctatttttttttttttttttttttttttttttt(seqidno:52)

acactctttccctacacgacgctcttccgatctacatgcatttttttttttttttttttttttttttttt(seqidno:53)

acactctttccctacacgacgctcttccgatctacgtcaatttttttttttttttttttttttttttttt(seqidno:54)

acactctttccctacacgacgctcttccgatctcatgctatttttttttttttttttttttttttttttt(seqidno:55)

acactctttccctacacgacgctcttccgatctctagtcatttttttttttttttttttttttttttttt(seqidno:56)

acactctttccctacacgacgctcttccgatcttgcatcatttttttttttttttttttttttttttttt(seqidno:57)

acactctttccctacacgacgctcttccgatctcatctgatttttttttttttttttttttttttttttt(seqidno:58)

acactctttccctacacgacgctcttccgatctcagatcatttttttttttttttttttttttttttttt(seqidno:59)

acactctttccctacacgacgctcttccgatctagcactatttttttttttttttttttttttttttttt(seqidno:60)

acactctttccctacacgacgctcttccgatctactcgaatttttttttttttttttttttttttttttt(seqidno:61)

acactctttccctacacgacgctcttccgatcttcacgtatttttttttttttttttttttttttttttt(seqidno:62)

acactctttccctacacgacgctcttccgatctgtctacatttttttttttttttttttttttttttttt(seqidno:63)

acactctttccctacacgacgctcttccgatcttctcagatttttttttttttttttttttttttttttt(seqidno:64)

acactctttccctacacgacgctcttccgatcttcagacatttttttttttttttttttttttttttttt(seqidno:65)

acactctttccctacacgacgctcttccgatctgactcaatttttttttttttttttttttttttttttt(seqidno:66)

acactctttccctacacgacgctcttccgatctcacagtatttttttttttttttttttttttttttttt(seqidno:67)

acactctttccctacacgacgctcttccgatctacactgatttttttttttttttttttttttttttttt(seqidno:68)

acactctttccctacacgacgctcttccgatctgcagtaatttttttttttttttttttttttttttttt(seqidno:69)

acactctttccctacacgacgctcttccgatctgctgatatttttttttttttttttttttttttttttt(seqidno:70)

acactctttccctacacgacgctcttccgatcttagtcgatttttttttttttttttttttttttttttt(seqidno:71)

acactctttccctacacgacgctcttccgatctatgacgatttttttttttttttttttttttttttttt(seqidno:72)

acactctttccctacacgacgctcttccgatctcgatgtatttttttttttttttttttttttttttttt(seqidno:73)

acactctttccctacacgacgctcttccgatctagatcgatttttttttttttttttttttttttttttt(seqidno:74)

acactctttccctacacgacgctcttccgatcttacgagatttttttttttttttttttttttttttttt(seqidno:75)

acactctttccctacacgacgctcttccgatctcgtagaatttttttttttttttttttttttttttttt(seqidno:76)

acactctttccctacacgacgctcttccgatcttgtacgatttttttttttttttttttttttttttttt(seqidno:77)

acactctttccctacacgacgctcttccgatctatcgtgatttttttttttttttttttttttttttttt(seqidno:78)

acactctttccctacacgacgctcttccgatctgtgcatatttttttttttttttttttttttttttttt(seqidno:79)

acactctttccctacacgacgctcttccgatctgagctaatttttttttttttttttttttttttttttt(seqidno:80)

acactctttccctacacgacgctcttccgatcttcagacgtttttttttttttttttttttttttttttt(seqidno:81)

acactctttccctacacgacgctcttccgatctgactcagtttttttttttttttttttttttttttttt(seqidno:82)

acactctttccctacacgacgctcttccgatctcacagtgtttttttttttttttttttttttttttttt(seqidno:83)

acactctttccctacacgacgctcttccgatctacactggtttttttttttttttttttttttttttttt(seqidno:84)

acactctttccctacacgacgctcttccgatctgcagtagtttttttttttttttttttttttttttttt(seqidno:85)

acactctttccctacacgacgctcttccgatctgctgatgtttttttttttttttttttttttttttttt(seqidno:86)

acactctttccctacacgacgctcttccgatcttagtcggtttttttttttttttttttttttttttttt(seqidno:87)

acactctttccctacacgacgctcttccgatctatgacggtttttttttttttttttttttttttttttt(seqidno:88)

acactctttccctacacgacgctcttccgatctcgatgtgtttttttttttttttttttttttttttttt(seqidno:89)

acactctttccctacacgacgctcttccgatctagatcggtttttttttttttttttttttttttttttt(seqidno:90)

acactctttccctacacgacgctcttccgatcttacgaggtttttttttttttttttttttttttttttt(seqidno:91)

acactctttccctacacgacgctcttccgatctcgtagagtttttttttttttttttttttttttttttt(seqidno:92)

acactctttccctacacgacgctcttccgatcttgtacggtttttttttttttttttttttttttttttt(seqidno:93)

acactctttccctacacgacgctcttccgatctatcgtggtttttttttttttttttttttttttttttt(seqidno:94)

acactctttccctacacgacgctcttccgatctgtgcatgtttttttttttttttttttttttttttttt(seqidno:95)

acactctttccctacacgacgctcttccgatctgagctagtttttttttttttttttttttttttttttt(seqidno:96)

该核酸纯化模块包括纯化用超顺磁性磁珠;

该双链cdna合成模块包括:双链合成buffer(10x)、双链合成enzymemix;

双链合成buffer(10x):200mmtris-hcl,120mm(nh4)2so4,50mmmgcl2,1.6mmb-nad,1.9mmdntpseach,ph7.4;

双链合成enzymemix:6,000units/mldnapolymerasei(e.coli)5,000units/mlrnaseh,25,000units/mle.colidnaligase,10mmtris-hcl(ph7.5),50mmkcl,1mmdtt,0.1mmedta,50%glycerol;

该测序文库构建模块包括片段化酶mix、中和buffer、引物1,引物2、pcrmix;其中:

片段化酶mix:nexteraxt(illumina)试剂盒中的tagmentdnabuffer和amplificationtagmentmix的混合物;

中和buffer:nexteraxt(illumina)试剂盒中的ntbuffer;

引物1:

序列为5’-aatgatacggcgaccaccgagatctacactctttccctacacg-3’(seqidno:97),浓度为5μm;

引物2:

含12种不同标签的引物,浓度为5μm:

5’-caagcagaagacggcatacgagattcgccttagtctcgtgggctcgg-3’(seqidno:98)

5’-caagcagaagacggcatacgagatctagtacggtctcgtgggctcgg-3’(seqidno:99)

5’-caagcagaagacggcatacgagatttctgcctgtctcgtgggctcgg-3’(seqidno:100)

5’-caagcagaagacggcatacgagatgctcaggagtctcgtgggctcgg-3’(seqidno:101)

5’-caagcagaagacggcatacgagataggagtccgtctcgtgggctcgg-3’(seqidno:102)

5’-caagcagaagacggcatacgagatcatgcctagtctcgtgggctcgg-3’(seqidno:103)

5’-caagcagaagacggcatacgagatgtagagaggtctcgtgggctcgg-3’(seqidno:104)

5’-caagcagaagacggcatacgagatcctctctggtctcgtgggctcgg-3’(seqidno:105)

5’-caagcagaagacggcatacgagatagcgtagcgtctcgtgggctcgg-3’(seqidno:106)

5’-caagcagaagacggcatacgagatcagcctcggtctcgtgggctcgg-3’(seqidno:107)

5’-caagcagaagacggcatacgagattgcctcttgtctcgtgggctcgg-3’(seqidno:108)

5’-caagcagaagacggcatacgagattcctctacgtctcgtgggctcgg-3’(seqidno:109)

pcrmix:166.5mmkcl,33.3mmtris-hcl(ph8.3),6.66mmmgcl2,1mmdntp,0.5u高保真dnapolymerase。

2.权利要求1所述的高通量基因表达谱检测试剂盒在高通量基因表达谱检测中的应用。


技术总结
本发明提供一种高通量基因表达谱检测试剂盒,该试剂盒包括逆转录反应模块、双链cDNA合成模块、核酸纯化模块、测序文库构建模块等4个模块的试剂。本发明提供的试剂盒具有低起始量、高通量、低成本等特点,能广泛应用于药物、生物材料等物理化学生物因素对体外细胞、体内组织、甚至个体的全基因表达谱的系统性检测。

技术研发人员:欧阳宏伟;吴兵兵;李余;邹晓晖
受保护的技术使用者:浙江大学
技术研发日:2018.10.30
技术公布日:2020.05.08
当前第2页1 2 
网友询问留言 已有0条留言
  • 还没有人留言评论。精彩留言会获得点赞!
1